Information for 15-ATGCTCCGTG (Motif 15)

C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A C T G C G T A A C T G A G T C T C G A A C G T
p-value:1e-4
log p-value:-9.972e+00
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 26.7bp
Average Position of motif in Background53.3 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ATGCTCCGTG
--GCTCCG--
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATGCTCCGTG-
GTCACGCTCNCTGA
 A C G T A C G T A C G T C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGCTCCGTG-
-GGGTACGTGC
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATGCTCCGTG---
---TTGCGTGCVA
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCTCCGTG
----TGCGTG
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGCTCCGTG
-NGCTN----
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGCTCCGTG----
ACATGCTACCTAATAC
 A C G T A C G T C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATGCTCCGTG-
---GGACGTGC
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATGCTCCGTG-
--GCCACGTGT
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T
A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATGCTCCGTG--
----TACGTGCV
 C G T A A G C T A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C