p-value: | 1e-9 |
log p-value: | -2.219e+01 |
Information Content per bp: | 1.826 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.09% |
Number of Background Sequences with motif | 128.8 |
Percentage of Background Sequences with motif | 0.27% |
Average Position of motif in Targets | 46.8 +/- 23.1bp |
Average Position of motif in Background | 50.9 +/- 33.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACTGGCTCCCTTG- --AGGVNCCTTTGT |
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Sox2/MA0143.3/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | ACTGGCTCCCTTG-- -------CCTTTGTT |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 3 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | ACTGGCTCCCTTG-- -------CCWTTGTY |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 4 |
Score: | 0.50 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | ACTGGCTCCCTTG---- -------CCWTTGTYYB |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 5 |
Score: | 0.49 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACTGGCTCCCTTG CACAGN-------- |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACTGGCTCCCTTG------- ---NNNTCCTTTGTTCTNNN |
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POL006.1_BREu/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACTGGCTCCCTTG ---GGCGCGCT-- |
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Myb/MA0100.2/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACTGGCTCCCTTG CCAACTGCCA------ |
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Sox3/MA0514.1/Jaspar
Match Rank: | 9 |
Score: | 0.48 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | ACTGGCTCCCTTG---- -------CCTTTGTTTT |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | ACTGGCTCCCTTG------- ----ANTCCTTTGTCTNNNN |
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