Information for 4-TGCTGCCATCTTG (Motif 4)

C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
Reverse Opposite:
A T G C T G C A C T G A A T C G T G C A A C G T A C T G A C T G A T G C C G T A A T C G A T G C G T C A
p-value:1e-13
log p-value:-3.100e+01
Information Content per bp:1.713
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.80%
Number of Background Sequences with motif317.1
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets46.3 +/- 26.4bp
Average Position of motif in Background50.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCATCTTG
-GCCGCCATCTTG
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCATCTTG
-GCNGCCATCTTG
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCTGCCATCTTG
--ATGCCAACC--
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCATCTTG--
ACTATGCCAACCTACC
 A C G T C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGCTGCCATCTTG
--TTGCCAAG---
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGCTGCCATCTTG
---TGTCANYT--
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCTGCCATCTTG
-CGTGCCAAG---
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCATCTTG
-VBTGWCAGCB--
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCATCTTG
---TGCCAA----
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTGCCATCTTG
-GGTGCCAAGT--
 C A G T A T C G T A G C C G A T A T C G G T A C A G T C G T C A A C G T A T G C A G C T A C G T T A C G
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T