p-value: | 1e-6 |
log p-value: | -1.398e+01 |
Information Content per bp: | 1.932 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.37% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 43.2 +/- 10.6bp |
Average Position of motif in Background | 53.2 +/- 18.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX9/MA0781.1/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACGCTTGACGGC- CGTCACGCATGACTGCA |
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PAX1/MA0779.1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACGCTTGACGGC- CGTCACGCATGACTGCA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACGCTTGACGGC GTCATGCHTGRCTGS |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACGCTTGACGGC NGTCACGCTTGGCTGC |
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Pax6/MA0069.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACGCTTGACGGC TTCACGCATGAGTT- |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACGCTTGACGGC CACGCA------- |
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PAX5/MA0014.2/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACGCTTGACGGC---- GTCACGCTTGGCTGCNCNN |
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CREB1/MA0018.2/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CACGCTTGACGGC- ------TGACGTCA |
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MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CACGCTTGACGGC ------TGACGT- |
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Pax2/MA0067.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CACGCTTGACGGC ---NCGTGACN-- |
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