Information for 7-CWGGDACAGAGGGCAG (Motif 18)

A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A G T C A G T C A G T C A C G T A T G C A C G T A T C G A C G T G C T A A G T C T A G C C G A T T A C G
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.750
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif40.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.7 +/- 25.9bp
Average Position of motif in Background50.8 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
GTAGGGCAAAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CWGGDACAGAGGGCAG
-TGGGGCAAAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
-TAGGGCAAAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
------CAAAGGTCAG
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
AGGGGTCAGAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CWGGDACAGAGGGCAG
-------TNNGGGCAG
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
-GAGGTCAAAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
GAGGTCAAAAGGTCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CWGGDACAGAGGGCAG
----AACAGATGGC--
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWGGDACAGAGGGCAG
AGAGTCCAAAGTCCA-
 A T G C G C T A A C T G A C T G C G A T T G C A T A G C C G T A A T C G C G T A C T A G A C T G A C T G A T G C C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T