Information for 5-GGACAGCACA (Motif 10)

C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A
Reverse Opposite:
G C A T A T C G A G C T A C T G A G T C A C G T A C T G G A C T A G T C G A T C
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.831
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.79%
Number of Background Sequences with motif689.7
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets52.8 +/- 23.2bp
Average Position of motif in Background50.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGACAGCACA--
-GTCAGCANNTN
 C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGACAGCACA---
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGACAGCACA
-CACAGN---
 C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGACAGCACA
TGAGTCAGCA--
 A C G T A C G T C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGACAGCACA
TTGACAGC---
 A C G T C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGACAGCACA--
--AAACCACAGC
 C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGACAGCACA---
-NWAACCACADNN
 C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGACAGCACA-------
-AGCGGCACACACGCAA
 C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGACAGCACA
TTGACAGG---
 A C G T C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGACAGCACA--
CTGAGTCAGCAATTT
 A C G T A C G T A C G T C T A G C T A G C T G A T G A C C G T A T C A G A G T C C T G A T A G C C G T A A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T