Information for 5-GAGCCAACCG (Motif 5)

C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
Reverse Opposite:
G T A C A C T G A C T G A G C T A C G T A C T G A C T G G T A C C G A T A G T C
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.795
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.9 +/- 21.7bp
Average Position of motif in Background48.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAGCCAACCG
ATGCCAACC-
 C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAACCG
CGTGCCAAG--
 A C G T C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAGCCAACCG---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAGCCAACCG
-TGCCAA---
 C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGCCAACCG
ATGCCCACC-
 C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAACCG
GGTGCCAAGT-
 A C G T C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGCCAACCG---
---CCAACTGCCA
 C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCAACCG
TGGGGCCCAC--
 A C G T A C G T C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCCAACCG-----
CGACCAACTGCCGTG
 C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGCCAACCG-
GGCGACCACCGA
 A C G T C T A G C G T A A C T G A G T C A G T C G T C A C T G A A G T C T G A C A C T G A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A