Information for 4-GAGAAATGAGGKA (Motif 3)

A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A
Reverse Opposite:
A G C T G T C A A G T C A G T C C G A T A G T C G C T A A C G T A C G T A G C T A T G C G C A T A G T C
p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.8 +/- 19.7bp
Average Position of motif in Background42.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGAAATGAGGKA---
--AAAAAGAGGAAGTA
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T A C G T
A C G T A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGAAATGAGGKA---
--AAAAAGCGGAAGTA
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGAAATGAGGKA
GGAGAAAGGTGCGA
 A C G T A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGAAATGAGGKA
--NTAATGAGCT-
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGAAATGAGGKA--
AAACATAATGAGGTTGC
 A C G T A C G T A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

BATF::JUN/MA0462.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAAATGAGGKA
--GAAATGACTCA
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A
A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAAATGAGGKA--
--AAGATGATGTCAT
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T
A C G T A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGAAATGAGGKA---
-AAAGATGATGTCATC
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGAAATGAGGKA--
GACGATAATGAGCTTGC
 A C G T A C G T A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GAGAAATGAGGKA
-----ATGACGTA
 A C T G C G T A T A C G C T G A T C G A C G T A C A G T A C T G C G T A A C T G A C T G C A G T C T G A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A