Information for 7-AGGCCAGRGGGACATC (Motif 9)

C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
Reverse Opposite:
T A C G C G T A A C G T A C T G C A G T A G T C A G T C T A G C A G T C A G T C A G C T C T A G A C T G A G T C A G T C C G A T
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.700
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.1 +/- 21.2bp
Average Position of motif in Background50.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGGCCAGRGGGACATC
AGGNCANNGTGACCT-
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGCCAGRGGGACATC
-GGTCANNGTGACCTN
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAGRGGGACATC
CAGGTCACCGTGACCTT
 A C G T C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAGRGGGACATC
GTAGGTCACTGGGTCA--
 A C G T A C G T C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGCCAGRGGGACATC
ATGCCAGACN------
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGCCAGRGGGACATC
-TGCCAA---------
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCAGRGGGACATC
CAGGCCNNGGCCNN---
 A C G T C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAGRGGGACATC
CGTGCCAAG--------
 A C G T C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGGCCAGRGGGACATC
AGGCCTNG--------
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGGCCAGRGGGACATC
-TGTCAGGGGGCG---
 C G T A C T A G A C T G G T A C A G T C C T G A C T A G T C A G A T C G C T A G A C T G G T C A G T A C G T C A G C A T A T G C
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T