Information for 7-TTATACAGCC (Motif 39)

A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A C G T C G T A A C G T C G T A C G T A
p-value:1e-4
log p-value:-9.538e+00
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.8 +/- 10.7bp
Average Position of motif in Background65.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATACAGCC----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATACAGCC----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATACAGCC
CCTTTTATAGNC
 A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATACAGCC----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TTATACAGCC
-----CAGCC
 A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTATACAGCC
---CACAGN-
 A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTATACAGCC
RTTATGYAAB-
 A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACAGCC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.57
Offset:-9
Orientation:reverse strand
Alignment:---------TTATACAGCC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTATACAGCC
GRTGMTRGAGCC
 A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G T C C G T A A C T G A G T C A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C