Information for 6-GTACATTGCC (Motif 38)

A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C
Reverse Opposite:
A T C G C T A G G T A C C G T A C G T A C G A T A T C G G C A T G T C A A G T C
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.756
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif134.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets70.9 +/- 25.3bp
Average Position of motif in Background47.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTACATTGCC
-CTCATTGTC
 A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTACATTGCC
---CTTTGT-
 A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTACATTGCC
TGTGGATTNNN
 A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTACATTGCC
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTACATTGCC--
NAGGTCANTGACCT
 A C G T A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTACATTGCC-----
TGGACTTTGNNCTNTG
 A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTACATTGCC----
TGGACTTTGNNCTCN
 A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTACATTGCC---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTACATTGCC--
--CCWTTGTYYB
 A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTACATTGCC--
--CCATTGTTTT
 A C T G A C G T C G T A A T G C C G T A A C G T C G A T A C T G A G T C T A G C A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T