Information for 17-GAAAATTAAGCAT (Motif 32)

C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A C G T A C G T C G T A G T C A A G C T A C G T A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 19.4bp
Average Position of motif in Background39.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAAAATTAAGCAT------
--AAAATATGCATAATAAA
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAAATTAAGCAT-
NWTAAYCYAATCAWN
 A C G T C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

DUX4/MA0468.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAAATTAAGCAT
-TAATTTAATCA-
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAAATTAAGCAT
--AAAGTAAACA-
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAAATTAAGCAT
--AAAGTAAACA-
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAAAATTAAGCAT--
--AAATTAATTAATC
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAAATTAAGCAT
CTAATTTAATCAA
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAAATTAAGCAT-
CAAACGTAAACAAT
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAATTAAGCAT
-TGAATTATGCAT
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAAATTAAGCAT
---GAATATTCAT
 C T A G C G T A C G T A C G T A C T G A A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T