Information for 16-CTTGTCCTACACA (Motif 28)

A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C T G A G T A C C G T A C G T A A C T G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 21.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTGTCCTACACA--
-TTGACCTANTTATN
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTCCTACACA
TGACCTTGACCT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTTGTCCTACACA-
------GTAAACAA
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTCCTACACA
TGACCTTGACCT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTTGTCCTACACA---
--TTTCCTAGAAAGCA
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

FOXO6/MA0849.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTTGTCCTACACA
------GTAAACA
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T T G C A G T C A C G T A A G T C C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTTGTCCTACACA
GAGCCCTTGTCCCTAA--
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTTGTCCTACACA-
------GTAAACAT
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CTTGTCCTACACA
------GTAAACA
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTTGTCCTACACA---
NNAGTCCCACTCNNNN
 A G T C A C G T A C G T A C T G A G C T A G T C A G T C A C G T C G T A G T A C C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A