Information for 14-GTCTGCGACACTC (Motif 27)

A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A T C G A C G T A G T C C T A G A G T C C G T A A C T G C T G A A G T C
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCGACACTC
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCGACACTC
CTGTCTGG-------
 A C G T A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCGACACTC
TGTCTGDCACCT--
 A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCGACACTC
TWGTCTGV-------
 A C G T A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTCTGCGACACTC-
----GCCACACCCA
 A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCGACACTC
CTGTCTGTCACCT--
 A C G T A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCGACACTC-
TGCCTGCGYCMCCTT
 A C G T A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTCTGCGACACTC
--TTGCAACATN-
 A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTCTGCGACACTC--
-----MRSCACTYAA
 A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTCTGCGACACTC--
---GGCCACACCCAN
 A C T G A G C T A G T C A C G T A C T G A G T C A C T G C G T A A T G C C G T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G