Information for 10-TKAWTTACAGYWT (Motif 23)

A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A C T A G A T G C A C G T A C T G A C G T C T G A C G T A C G T A A C G T G T A C C G T A
p-value:1e-9
log p-value:-2.111e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 23.6bp
Average Position of motif in Background32.1 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT
NTGATTGACAGN--
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TKAWTTACAGYWT
TGAGTGACAGSC-
 A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT
NTGATTTATGGCC-
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TKAWTTACAGYWT
BTGABTGACAGS--
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TKAWTTACAGYWT
TGATTTATGGCC-
 A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TKAWTTACAGYWT---
GATATTGACAGCTGCGT
 A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TKAWTTACAGYWT
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G A T A C G T A G C T C G T A A G T C C G T A A T C G A G T C C G A T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T