Information for 9-CTTTTGGGATTAC (Motif 18)

A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
Reverse Opposite:
A C T G C A G T G T C A G C T A A G C T A T G C G A T C A G T C C G T A C T G A T C G A C T G A T C A G
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.700
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif36.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.5 +/- 25.1bp
Average Position of motif in Background51.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CTTTTGGGATTAC-
-----GGGATTANN
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTTTTGGGATTAC
----NGGGATTA-
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTTTTGGGATTAC
-----RGGATTAR
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTTTTGGGATTAC
-----GGGATTAA
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTTTTGGGATTAC-
----VRGGATTARN
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTTGGGATTAC---
CGTTGGGGATTAGCCT
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTTTTGGGATTAC
-----NGGATTAA
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTTTTGGGATTAC
-----CGGATTAN
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTTTTGGGATTAC-
----NNGGATTAGN
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C A C G T
A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0124.1_Obox5_1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTTTGGGATTAC-----
-TAGAGGGATTAAATTTC
 A G T C A G C T A G C T A G C T C G A T A C T G C T A G A T C G C T G A C A G T A C G T G T C A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C