Information for 3-TGCATNAATTTAT (Motif 8)

C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T G T C A C G T A C G T A A G C T A C G T A C T G C T G A A C G T C T A G T G A C G C T A
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.826
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif21.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.3 +/- 26.8bp
Average Position of motif in Background47.5 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0090.1_Lbx2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCATNAATTTAT----
TGCATTAATTAATGCGA
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

Arx/MA0874.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCATNAATTTAT---
GTCCATTAATTAATGGA
 A C G T C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A

PH0003.1_Arx/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCATNAATTTAT---
GTCCATTAATTAATGGA
 A C G T C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A

PH0099.1_Lhx9/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCATNAATTTAT----
CCCATTAATTAATCACC
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C A T G C G A T C C T G A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A C G A T G A T C T G C A A T G C A G T C

PH0110.1_Nkx1-2/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCATNAATTTAT----
TGNACTAATTAGTGNAN
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C

PH0029.1_En2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCATNAATTTAT----
TGCACTAATTAGTGGAA
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T C A G G T A C T G C A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A G C T A T C G T C A G G C T A G C A T

PH0019.1_Dbx2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCATNAATTTAT--
TTTAATTAATTAATTC
 A C G T C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCATNAATTTAT--
GNNAATTAATTAATCA
 A C G T C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A

PH0156.1_Rax/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCATNAATTTAT----
TGCACTAATTAGCGCAC
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T A C G A G T C T C G A A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G T C A T C G T A G C T G C A G A T C

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCATNAATTTAT---
NNNNTGAATTCANNNC
 C G A T A C T G A G T C C G T A A G C T A G T C C G T A C T G A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C