Information for 4-DKAAGAAGGTGCTGAK (Motif 6)

C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
Reverse Opposite:
G T C A G A C T G A T C C G T A A C T G G A T C C G T A G T A C G T A C C A G T C G A T G T A C G A C T A C G T G T A C G T C A
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.571
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif356.0
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets45.2 +/- 21.1bp
Average Position of motif in Background51.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:DKAAGAAGGTGCTGAK
GGAGAAAGGTGCGA--
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:DKAAGAAGGTGCTGAK
NTAATGAGCT------
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----DKAAGAAGGTGCTGAK
GACGATAATGAGCTTGC---
 A C G T A C G T A C G T A C G T C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-DKAAGAAGGTGCTGAK
TATAAGTAGGTCAA---
 A C G T C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:DKAAGAAGGTGCTGAK
TTAATTAG--------
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:DKAAGAAGGTGCTGAK
---AACAGGTGT----
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:DKAAGAAGGTGCTGAK
--AAYTAGGTCA----
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----DKAAGAAGGTGCTGAK
AAACATAATGAGGTTGC---
 A C G T A C G T A C G T A C G T C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:DKAAGAAGGTGCTGAK---
----AAAWWTGCTGACWWD
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:DKAAGAAGGTGCTGAK----
-----AAANTGCTGACTNAG
 C A G T C A T G G T C A C T G A C A T G G C T A G C T A A C T G C A T G G A C T C T A G T G A C C G A T C A T G C T G A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G