Information for 11-GCAAGAAAGAAAG (Motif 32)

A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
Reverse Opposite:
G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.301e+01
Information Content per bp:1.926
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.2 +/- 10.1bp
Average Position of motif in Background52.9 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAAGAAAGAAAG-----
GGAAGGAAGGAAGGAAGG
 A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAAGAAAGAAAG
TACTGGAAAAAAAA
 A C G T A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAAGAAAGAAAG-
AACAAACAACAAGAG
 A C G T A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAAGAAAGAAAG
BAGTCATANTGAAAG
 A C G T A C G T A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAAGAAAGAAAG-
--AGAAACGAAAGT
 A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCAAGAAAGAAAG-
----AAAACAAAGG
 A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAAGAAAGAAAG
ACCGGCAATTAATAAA-
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCAAGAAAGAAAG--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAAGAAAGAAAG
--AAGCCATAAAA
 A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAAGAAAGAAAG
GGAACAAAGR---
 A C T G G T A C C G T A C G T A A C T G G T C A C G T A C G T A A C T G C G T A C G T A C G T A A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T