Information for 10-CCGCGGHTTTTTG (Motif 30)

A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C G T A G T C A G T C A C A T G A T G C G T A C A C T G G T A C C T A G A C T G
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.784
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 21.2bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGGHTTTTTG
TACTTCCGCTTTTT-
 A C G T A C G T A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG------
----ANATTTTTGCAANTN
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG-----
-NNCTTTGTTTTGNTNNN
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG--
CCTTGCAATTTTTNN
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG------
-----TTTTTTTTCNNGTN
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG------
-----NNTTTTTCTTATNT
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG------
--NNNNTTTTTTTTTNAAC
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG------
--GNATTTTTTTTTTGANC
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCGCGGHTTTTTG-------
---TNNTCCTTTGTTCTNNT
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCGCGGHTTTTTG----
-------CCTTTGTTTT
 A G T C A G T C A C T G T G A C A C T G A T C G G T A C A C G T A C G T C G A T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T