Information for 7-GGGGAACGTA (Motif 28)

A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
Reverse Opposite:
A C G T C G T A A T G C A C T G A C G T A C G T A G T C G T A C A G T C A G T C
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 18.2bp
Average Position of motif in Background49.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACGTA
TGGGGA-----
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGGGAACGTA
--BGCACGTA
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACGTA
AGAGGAA----
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGGAACGTA-
-TGGAACAGMA
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGGAACGTA--
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGGAACGTA-
---TTACGTAA
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------GGGGAACGTA
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGGAACGTA---
---GCACGTACCC
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGGAACGTA-
---GCACGTAY
 A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAACGTA
GAAAGTGAAAGT-
 A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A G T C A T C G A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T