Information for 6-TTCAGACTRA (Motif 27)

C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
Reverse Opposite:
A C G T A G C T C G T A A C T G C G A T G T A C G A C T A C T G C G T A C G T A
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.831
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif89.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.6 +/- 26.8bp
Average Position of motif in Background49.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTCAGACTRA----
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCAGACTRA---
CTTTCANTATGACTV
 A C G T A C G T C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTCAGACTRA
-BCAGACWA-
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCAGACTRA
-CCAGACAG-
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCAGACTRA
TGCTGACTCA
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

POL002.1_INR/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTCAGACTRA
-TCAGTCTT-
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTCAGACTRA-
-CCAGACRSVB
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTCAGACTRA--
TGCTGASTCAGC
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A A C G T A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TTCAGACTRA
---TGACTCA
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTCAGACTRA
TGCTGAGTCA
 C G A T A C G T A G T C C T G A A C T G C G T A A G T C A C G T C T G A C G T A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A