Information for 15-TGAATAGAGCATAAGT (Motif 26)

C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
Reverse Opposite:
C G T A G A T C G A C T G C A T C T G A A C G T C T A G A G T C A C G T G A T C A G C T T C G A C G A T A C G T G T A C C G T A
p-value:1e-7
log p-value:-1.653e+01
Information Content per bp:1.738
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 13.7bp
Average Position of motif in Background51.3 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0014.1_Cphx/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGAATAGAGCATAAGT
NTTGATTNNATCAN----
 A C G T A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGAGCATAAGT
ATGAATWATTCATGA--
 A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAATAGAGCATAAGT
TGAATTATGCAT----
 C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGAGCATAAGT
ATGCATWATGCATRW--
 A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATAGAGCATAAGT
NNTNTCATGAATGT---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAATAGAGCATAAGT
NTGATTAAATTAN----
 A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGAATAGAGCATAAGT
ACTATGAATGAATGAT----
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGAGCATAAGT
ATGMATATDC-------
 A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAATAGAGCATAAGT
TGATTAAATTA-----
 C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGAATAGAGCATAAGT
ATGAATAATTAATG---
 A C G T C G A T A C T G C G T A C G T A A C G T C T G A C A T G C G T A T C A G A G T C C G T A A G C T C G T A C G T A C T A G C G A T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T A C G T