Information for 10-ATWAAAGAAAGGTGAG (Motif 20)

C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
Reverse Opposite:
G A T C A C G T A T G C C G T A A G T C A G T C C G A T C G A T A C G T G T A C C G A T A C G T A C G T C G T A G C T A G A C T
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.9 +/- 27.3bp
Average Position of motif in Background50.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ATWAAAGAAAGGTGAG
---ANGNAAAGGTCA-
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG---
---TCTCAAAGGTCACGAG
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG---
---TCTCAAAGGTCACCTG
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG
-----ATCAAGGTCA-
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATWAAAGAAAGGTGAG
AGGTCAACTAAAGGTCA-
 A C G T A C G T C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG-
---GGAGAAAGGTGCGA
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG
------CAAAGGTCAG
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.60
Offset:8
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG---
--------CAGGTAAGTAT
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATWAAAGAAAGGTGAG---
------CAAAGGTCAAGGG
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ATWAAAGAAAGGTGAG
------TCAAGGTCAN
 C T G A C A G T G C A T G T C A G T C A C G T A C A T G G T C A C G T A C G T A C T A G C T A G A C G T A T C G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C