Information for 1-AGKTTTRATAWCTWTS (Motif 2)

C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A C T G A A C T G C G T A A C G T C G T A A C G T G A C T C T G A C G T A C G T A G T A C A G T C C G A T
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 24.6bp
Average Position of motif in Background12.8 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS
---TTTAAT-------
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGKTTTRATAWCTWTS
----AAGATATCCTT-
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS--
-NNNCTGATATCTCNNNN
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGKTTTRATAWCTWTS
NNTTTTTCTTATNT---
 A C G T C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGKTTTRATAWCTWTS
NGANTTTTATGGCTCN-
 A C G T C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGKTTTRATAWCTWTS
ATGGTTCAATAATTTTG
 A C G T C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS
NNATNTGATANNNNN-
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS
--NTTTTATTACN---
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS-
AATNTTGATACCCTATN
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGKTTTRATAWCTWTS
--TTTTTATTGC----
 C G T A A C T G A C T G A C G T A C G T A G C T C T A G C G T A A C G T C G T A C G A T A G T C A G C T C G A T A C G T A T C G
A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T