Information for 4-CAAGGGATGA (Motif 19)

T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A
Reverse Opposite:
A C G T A G T C G C T A A C G T A G T C G A T C A G T C A C G T A C G T A T C G
p-value:1e-8
log p-value:-1.913e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif146.8
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets69.6 +/- 24.8bp
Average Position of motif in Background51.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAAGGGATGA----
TATTATGGGATGGATAA
 A C G T A C G T A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGATGA-----
TTAGAGGGATTAACAAT
 A C G T A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGATGA
AACAAAGG----
 A C G T A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAAGGGATGA---
---GGGAGGACNG
 T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGATGA
NGTCCCNNGGGA---
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGATGA------
NNAAGGGATTAACGANT
 A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATGA------
TGAAGGGATTAATCATC
 A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATGA------
TGTAGGGATTAATTGTC
 A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATGA------
AGAGGGGATTAATTTAT
 A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGATGA
RACAAWGG----
 A C G T A C G T T A G C C G T A C G T A A C T G C T A G A C T G G T C A C G A T A C T G T G C A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T