Information for 6-TGAATATGAATTT (Motif 14)

A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T G C T A A C G T A G C T A T G C T C G A
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.834
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.9 +/- 24.5bp
Average Position of motif in Background56.7 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGAATATGAATTT
NNTNTCATGAATGT
 A C G T A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGAATATGAATTT--
-----ATGAATATTC
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TGAATATGAATTT--
-----ATGMATATDC
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGAATATGAATTT-----
--NNNNTGAATTCANNNC
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGAATATGAATTT
YATGCATATRCATRT
 A C G T A C G T A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAATATGAATTT----
NTTNTATGAATGTGNNC
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGAATATGAATTT-
---ATATTAATTAA
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAATATGAATTT-
ATGAATATTCATGAG
 A C G T A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGAATATGAATTT-
----NTGGAATGTN
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAATATGAATTT---
--ANTATCGATTTTTN
 A C G T A T C G C T G A C G T A C A G T C G T A C G A T A C T G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T