Information for 6-GAATTTAARGAWTTGA (Motif 10)

T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A
Reverse Opposite:
A C G T T A G C C G T A C G T A C G T A C G A T A G T C G A T C C G A T A C G T G T C A G T C A C G T A C A G T G A C T A G T C
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.697
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets61.6 +/- 23.1bp
Average Position of motif in Background54.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA--
--NNNTATTGAATTGNNN
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PH0088.1_Isl2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA-
-AAATTAATTGATTTNG
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T
A C G T C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA-
---NTTATTGATTTTTT
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T
A C G T A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA-
---ATTATCGATTTTTT
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T
A C G T A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0149.1_Pou3f4/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA--
-GANTTAATTAATTAANN
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T A C G T
A C G T C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA-
---ANTATCGATTTTTN
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T
A C G T A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAATTTAARGAWTTGA--
-NATTTAAGTACTTNAAA
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A A C G T A C G T
A C G T C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

Vdr/MA0693.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAATTTAARGAWTTGA
GAGTTCATTGAGTTCA
 T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAATTTAARGAWTTGA
NNANTTTTATTGGNNN--
 A C G T A C G T T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GAATTTAARGAWTTGA
GGACTGAATTCATGCC-----
 A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A G C A T A C G T A C G T T G C A C G T A C T A G T C A G C G T A C G A T G C A T A C G T A T C G C G T A
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T A C G T A C G T A C G T A C G T