Information for 17-CTGATTCACACCAGGA (Motif 24)

G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
Reverse Opposite:
G A C T G T A C G A T C C G A T T C A G A C T G C G A T A C T G C A G T T A C G G T C A C G T A C G A T G T A C C G T A A C T G
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.687
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.3 +/- 18.0bp
Average Position of motif in Background63.0 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTGATTCACACCAGGA
---ATTAACACCT---
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
BTGABTGACAGS----
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
---TTTCACACCT---
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
NTGATTGACAGN----
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
----TTCACACCTT--
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
---KTTCACACCT---
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
---TTTCACACCTN--
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTGATTCACACCAGGA--
------CACAGCAGGGGG
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTGATTCACACCAGGA
-----TCACACCT---
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGATTCACACCAGGA--
---GAGCACAGCAGGACA
 G T A C C G A T A C T G C G T A C G A T C A G T A G T C G C T A A G T C G C T A A G T C A G T C C G T A C A T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A