Information for 17-ATCGGCTAGCCAC (Motif 22)

G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C G T C T G A A T C G A G T C G A T C A C T G C G T A A C G T
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 23.5bp
Average Position of motif in Background68.5 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATCGGCTAGCCAC
--CGTCTAGACA-
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C
A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATCGGCTAGCCAC---
-CCGCATAGCAACGGA
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATCGGCTAGCCAC
-----BCAGACWA
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATCGGCTAGCCAC
-------ATCCAC
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ATCGGCTAGCCAC---
------AAACCACANN
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATCGGCTAGCCAC-
TGTTKCCTAGCAACM
 A C G T G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ATCGGCTAGCCAC----
------AAACCACAGAN
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATCGGCTAGCCAC--
-----NAAACCACAG
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATCGGCTAGCCAC----
-----NWAACCACADNN
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ATCGGCTAGCCAC
------CAGCC--
 G T C A A C G T A G T C C T A G A C T G A T G C A G C T C G T A A C T G A G T C A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T