Information for 4-CTCCTATAGAAACACA (Motif 9)

A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C A T G C T G A A C T G
p-value:1e-13
log p-value:-3.110e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.4 +/- 22.3bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCCTATAGAAACACA--
---GTATAAAAGGCGGGG
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCCTATAGAAACACA--
---GTATAAAAGGCGGGG
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCCTATAGAAACACA
---WWATRTAAACAN-
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTATAGAAACACA
BAGTCATANTGAAAG---
 A C G T A C G T A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCCTATAGAAACACA-
--CGTATCGAAACCAAA
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A A C G T
A C G T A C G T T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCCTATAGAAACACA-
--CAAAAGTAAACAAAG
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTATAGAAACACA
WNAGTCADAVTGAAACTN-
 A C G T A C G T A C G T A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCCTATAGAAACACA
----WWTRTAAACAVG
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCCTATAGAAACACA
--CCAATAAAAC----
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCCTATAGAAACACA
----TAAGTAAACAAA
 A G T C A G C T G T A C G T A C A C G T C G T A A C G T G T C A C T A G C G T A G T C A C G T A A G T C G T C A G T A C C G T A
A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A