Information for 3-CTAAAAATAG (Motif 2)

T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G
Reverse Opposite:
A T G C A G C T T C G A G A C T C G A T C G A T G A C T G C A T C T G A A T C G
p-value:1e-27
log p-value:-6.384e+01
Information Content per bp:1.696
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif12.05%
Number of Background Sequences with motif1493.9
Percentage of Background Sequences with motif3.16%
Average Position of motif in Targets48.4 +/- 24.4bp
Average Position of motif in Background49.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
DCYAAAAATAGM
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CTAAAAATAG
CCAAAAATAG
 T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTAAAAATAG-
GCTAAAAATAGC
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAATAG--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
TCTAAAAATAGA
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
ACTATAAATAGA
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAATAG-
GCTATAAATAGC
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CTAAAAATAG-
KCCAAAAATAGC
 A C G T T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTAAAAATAG
CCATATATGG
 T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAAAAATAG
-GAACAATGG
 T A G C G A C T C G T A C T G A C G T A C G T A C T G A A G C T C T G A T A C G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G