Information for 4-GCCCCGCCYY (Motif 4)

C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T
Reverse Opposite:
C T G A C T A G A C T G A C T G A G T C A C T G A C T G C T A G C A T G A G T C
p-value:1e-41
log p-value:-9.606e+01
Information Content per bp:1.725
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif21.55%
Number of Background Sequences with motif2951.8
Percentage of Background Sequences with motif6.67%
Average Position of motif in Targets51.2 +/- 26.6bp
Average Position of motif in Background47.2 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCYY--
NAGCCCCGCCCCCN
 A C G T A C G T C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCYY-
GCCCCGCCCCC
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCYY-----
GCCCCGCCCCCTCCC
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCYY
GCCCCGCCCC
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCYY-
GGCCCCGCCCCC
 A C G T C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCYY---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGCCYY---
NRGCCCCRCCCHBNN
 A C G T A C G T C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCYY
GCCMCRCCCH
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCYY
GCCCCACCCA
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCYY--
GCTCCGCCCMCY
 C T A G G T A C A G T C G T A C A G T C T C A G A G T C A G T C A G T C G A C T A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T