Information for 22-AATAWAARTG (Motif 29)

C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
Reverse Opposite:
G A T C C G T A A G C T A G C T A C G T C G T A A C G T C G T A A G C T A G C T
p-value:1e-3
log p-value:-8.830e+00
Information Content per bp:1.777
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif61.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets63.0 +/- 22.8bp
Average Position of motif in Background43.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0186.1_Tcf3_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AATAWAARTG
AGCCGAAAAAAAAAT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AATAWAARTG
CCAATAAAAA--
 A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----AATAWAARTG-
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AATAWAARTG
CCAATAAAAA--
 A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AATAWAARTG-
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AATAWAARTG--
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATAWAARTG
CCAATAAAAC--
 A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATAWAARTG
GCAATAAAA---
 A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AATAWAARTG
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATAWAARTG
NCYAATAAAA---
 A C G T A C G T A C G T C T G A C T G A C G A T C G T A C G A T C G T A C T G A C T G A C G A T C T A G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T