Information for 9-GGAGGGTAAATAC (Motif 15)

A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C
Reverse Opposite:
A C T G A C G T G T C A C G A T A C G T A C G T G T C A A G T C A G T C A G T C A C G T A T G C A T G C
p-value:1e-10
log p-value:-2.414e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 24.7bp
Average Position of motif in Background58.5 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0053.1_Hoxa6/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAGGGTAAATAC-----
--AAGGTAATTACCTAAT
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGGGTAAATAC
--WAAGTAAAYA-
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGGGTAAATAC-----
--ACNNTAATTACNNCAN
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGGGTAAATAC-----
--NNNGTAATTACNNATA
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

PH0052.1_Hoxa5/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGAGGGTAAATAC-----
--ACGGTAATTAGCTCAG
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGAGGGTAAATAC
--AAAGTAAACA-
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGAGGGTAAATAC-----
--AAGGTAATTAGCTCAT
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAGGGTAAATAC--
NCWRWGTAAACANSV
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGGGTAAATAC
--AAAGTAAACA-
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAGGGTAAATAC-----
-NNNGGTAATTATNGNGN
 A T C G A T C G C G T A C T A G A C T G A C T G A C G T C G T A C G T A C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A