Information for 13-TGTTGTGTTG (Motif 13)

A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G
Reverse Opposite:
G T A C G C T A C T G A T G A C C G T A A T G C G T C A C T G A G A T C C T G A
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.836
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif178.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.0 +/- 22.3bp
Average Position of motif in Background46.7 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGTGTTG--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTGTTG--
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTGTTG-
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTGTTG----
NNTTTTGTTTTGATNT
 A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTGTTG-
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTTGTGTTG
CCATTGTTNY-
 A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGTGTTG
NNHTGTGGTTWN-
 A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGTGTTG---
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTTGTGTTG-------
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTTGTGTTG
GCTGTGGTTT--
 A C G T A C G T A G C T C T A G A G C T A C G T A T C G A C G T A C T G A G C T C G A T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T