Information for 3-AGTCCGGCGMSCC (Motif 5)

G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
Reverse Opposite:
A T C G A T C G T A G C A C G T A T G C T C A G A T G C G T A C A C T G A T C G C G T A A G T C C A G T
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.719
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif64.0
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.4 +/- 21.6bp
Average Position of motif in Background53.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTCCGGCGMSCC
CAACGTCCGCGG----
 A C G T A C G T A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCGGCGMSCC
CAGGCCNNGGCCNN
 A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGTCCGGCGMSCC--
TGACCTCTGACCCCN
 G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCGGCGMSCC
NACTTCCGGT-----
 A C G T A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGGCGMSCC
AGCAACAGCCGCACC
 A C G T A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGTCCGGCGMSCC-----
--NNNGGGGCGCCCCCNN
 G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGGCGMSCC
NRYTTCCGGY-----
 A C G T A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGGCGMSCC
CTGTCTGG------
 A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AGTCCGGCGMSCC-
TGACCTTTGACCCC
 G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGGCGMSCC
NRYTTCCGGH-----
 A C G T A C G T G C T A A C T G C G A T A T G C A G T C A C T G A T C G A G T C A T C G T G C A A T C G A T G C A T G C
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T