Information for 7-GRGGGMKCCCYCT (Motif 17)

A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
Reverse Opposite:
G C T A A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.317e+01
Information Content per bp:1.874
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 35.1bp
Average Position of motif in Background72.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GRGGGMKCCCYCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GRGGGMKCCCYCT
GGGGATTCCCCC-
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GRGGGMKCCCYCT
AGGGGATTCCCCT
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GRGGGMKCCCYCT
AGGGGATTCCCCT
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GRGGGMKCCCYCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GRGGGMKCCCYCT
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GRGGGMKCCCYCT----
-----CGCCCCCTGACA
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRGGGMKCCCYCT----
GGTCCCGCCCCCTTCTC
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GRGGGMKCCCYCT
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GRGGGMKCCCYCT--------
--TAGCGCCCCCTGGTGGCCA
 A C T G C T A G A C T G A C T G A C T G G T A C A C T G A G T C A G T C A G T C A G T C A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A