Information for 4-GACGTCAGAG (Motif 12)

A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
Reverse Opposite:
A G T C A G C T A G T C A C G T A C T G C G T A G T A C A C T G A G C T A G T C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif48.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.8 +/- 23.1bp
Average Position of motif in Background42.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCAGAG
TGACGTCA---
 A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GACGTCAGAG
-ACGTCA---
 A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GACGTCAGAG-
ACGATGACGTCATCGA
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GACGTCAGAG
GTGACGTCACCG
 A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GACGTCAGAG
RTGACGTCAYCN
 A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GACGTCAGAG
GATGACGTCA---
 A C G T A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A C G T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----GACGTCAGAG-
NCGATGACGTCATCGN
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GACGTCAGAG
ATGACGTCAYYN
 A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Crem/MA0609.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GACGTCAGAG
TTACGTCATN-
 A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GACGTCAGAG
NGATGACGTCAT--
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C C A T G A C G T A G T C C G T A A C T G T C G A C T A G
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T A C G T