Information for 5-AGCCTTGTTTGTA (Motif 11)

C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
Reverse Opposite:
A C G T C G T A G T A C G C T A C G T A C G T A T G A C C G T A C G T A A C T G A C T G A G T C G C A T
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.846
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 19.9bp
Average Position of motif in Background29.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCCTTGTTTGTA---
-CCATTGTATGCAAAT
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
-CCWTTGTYYB--
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
--CTTTGT-----
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
-CCATTGTTYB--
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
-CCATTGTTTT--
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCCTTGTTTGTA
NCCATTGTTY---
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
-CCATTGTTNY--
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCTTGTTTGTA--
TTCAATTGTTCTAAAA
 A C G T C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
---ATTGTTA---
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGCCTTGTTTGTA
---ATTGTT----
 C G T A C T A G G T A C T G A C A C G T A C G T A C T G A C G T C G A T C G A T A C T G G A C T C G T A
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T