Information for 7-VGGCATGATAACAGAT (Motif 8)

T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T
Reverse Opposite:
C T G A A C G T A T G C C A G T A C T G A C G T C G A T C G T A A C G T A G T C C G T A A C G T C T A G A T G C A G T C A G C T
p-value:1e-13
log p-value:-3.059e+01
Information Content per bp:1.767
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 20.7bp
Average Position of motif in Background36.8 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANNNATGATACCCCATC
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANANNTGATACCCTATN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
AATNTTGATACCCTATN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANANGTGATACCCTATN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANANGTGATACCCTATN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANANGTGATACCCCATT
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
ANANNTGATACCCNATN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:VGGCATGATAACAGAT
-----AGATAAGA---
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:VGGCATGATAACAGAT
-----AGATAASR---
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:VGGCATGATAACAGAT-
TNNNATGATTTCNNCNN
 T C G A C T A G A T C G A G T C G T C A A C G T A C T G C G T A A C G T G C T A T G C A A G T C G T C A A T C G C G T A A G C T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T