Information for 4-AGAAATCWSYYYCWMA (Motif 4)

C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C T A G C T G A C T G A A T C G C G A T A C T G C G T A A C G T A C G T G A C T A G T C A C G T
p-value:1e-16
log p-value:-3.826e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 24.9bp
Average Position of motif in Background56.4 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCWSYYYCWMA
AAGGCGAAATCATCGCA---
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGAAATCWSYYYCWMA
AGAAATGACTTCCCT-
 C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGAAATCWSYYYCWMA
GACAGAGATATCAGTGT----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGAAATCWSYYYCWMA
-CAAATCACTG-----
 C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCWSYYYCWMA
GGCCATAAATCAC-------
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCWSYYYCWMA
GGCCATAAATCA--------
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGAAATCWSYYYCWMA
GCCATAAATCA--------
 A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAAATCWSYYYCWMA
GGCCATAAATCA--------
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAAATCWSYYYCWMA
--AAATCACTGC----
 C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAAATCWSYYYCWMA
--AAATCACAGCA---
 C G T A C T A G C G T A C G T A C G T A A C G T A G T C C G T A T A G C A G C T A G C T A G T C A G T C C G A T T G A C C G T A
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T