Information for 9-TCACSTTWCT (Motif 21)

A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C T G A C G T A A T C G A T C G A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.815
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif105.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets53.3 +/- 24.7bp
Average Position of motif in Background51.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---TCACSTTWCT
GKVTCADRTTWC-
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TCACSTTWCT
GKMTCADRTTWC-
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCACSTTWCT-
GTCACGTGACYV
 A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T A C G T
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACSTTWCT--
TCACGTGACCGG
 A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

BHLHE41/MA0636.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCACSTTWCT
GTCACGTGAC-
 A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCACSTTWCT
ATCACGTGAC-
 A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCACSTTWCT
ATCACGTGAC-
 A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCACSTTWCT
GGTCACATGAC-
 A C G T A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TCACSTTWCT-----
GGAAGAGTCACGTGACCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCACSTTWCT
ATCACCCCAC-
 A C G T A C G T A G T C C G T A A T G C T A G C A C G T A G C T C G A T A G T C A G C T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T