Information for 7-AGMATRCWCACKTSWG (Motif 9)

C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A A T C G C G T A T G A C A C T G A C G T C T A G C G A T A C T G A G T C C G T A A C G T A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGMATRCWCACKTSWG
TCCAATCCACA------
 A C G T C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG------
GGAAGAGTCACGTGACCAATAC
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AGMATRCWCACKTSWG
--------CACGTG--
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG
-----CCTCACCTG--
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGMATRCWCACKTSWG
---TTTCACACCT---
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG
-------GCACGTGT-
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG
---ATTAACACCT---
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGMATRCWCACKTSWG
SSAATCCACANN----
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG
-------GCACGTGA-
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGMATRCWCACKTSWG
------GHCACGTG--
 C G T A A C T G G T C A C G T A A C G T C T A G A G T C C G T A A G T C G T C A A G T C A C T G A C G T A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T