Information for 15-AGATCAAGTC (Motif 28)

C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
Reverse Opposite:
A C T G T C G A G T A C A C G T C G A T A C T G C T G A G C A T A G T C A C G T
p-value:1e-7
log p-value:-1.819e+01
Information Content per bp:1.838
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif87.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.7 +/- 24.4bp
Average Position of motif in Background51.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATCAAGTC--
AGGTCAAGGTCA
 C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAAGTC-------
NDBAGATRWTATCTVNNNNN
 A C G T A C G T A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGATCAAGTC
AGATAASR--
 C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGATCAAGTC---
AAAGATCAAAGGGTT
 A C G T A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGATCAAGTC
AAGGTCAC---
 A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGATCAAGTC
AAAGATCAAAGG
 A C G T A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGATCAAGTC
AGATAAGA--
 C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGATCAAGTC--
AGGTCAAGGTCA
 C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAAGTC----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGATCAAGTC
HNRAATCAAT--
 A C G T A C G T C G T A A C T G C G T A A G C T T G A C C G T A C G T A C A T G A G C T A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T