Information for 10-GWWARTCAWGKTTGRG (Motif 23)

A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A C G T A G T C A A G T C C G T A A C G T A C T G C G T A A G T C C G A T C G T A G C T A A G T C
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.8 +/- 16.0bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GWWARTCAWGKTTGRG
---AGTCACGC-----
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:2
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GWWARTCAWGKTTGRG
VAAACYKGTHWAACMRGTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GWWARTCAWGKTTGRG---
---NGTCACGCTTGGCTGC
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GWWARTCAWGKTTGRG
AAAAGTCAA-------
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GWWARTCAWGKTTGRG
--NNGTANTGTTTTNC
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GWWARTCAWGKTTGRG
----GTCATN------
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GWWARTCAWGKTTGRG
NNAATTAGTCACGGT----
 A C G T A C G T A C G T A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GWWARTCAWGKTTGRG
NNCTNAATTATGANN---
 A C G T A C G T A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GWWARTCAWGKTTGRG
-------AAGCTTG--
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GWWARTCAWGKTTGRG
--AANTCATGCGTGAA
 A C T G C G A T C G A T C G T A C T A G C G A T A G T C C G T A C G A T C T A G A C G T A C G T A C G T A C T G C T A G A C T G
A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A