Information for 11-CCMCWGAYAGKCA (Motif 18)

A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A G T C A C G T C T G A A C G T A G T C C G T A A C T G C A T G A C T G A C T G
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 26.0bp
Average Position of motif in Background55.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCMCWGAYAGKCA
CGCCCCCTGACA----
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCMCWGAYAGKCA--
---BTGABTGACAGS
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCMCWGAYAGKCA-
--NCTGTCAATCAN
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCMCWGAYAGKCA
--VBTGWCAGCB-
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCMCWGAYAGKCA
--CCAGACAG---
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCMCWGAYAGKCA
---TTGACAGC--
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCMCWGAYAGKCA
--CCAGACRSVB-
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCMCWGAYAGKCA--
TCCCAGMCRAGCCCC
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCMCWGAYAGKCA
---TTGACAG---
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCMCWGAYAGKCA
-GSCTGTCACTCA
 A G T C A G T C G T A C A G T C C G A T A C T G C G T A G A C T C G T A A C T G A C T G A G T C C G T A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A