Information for 8-GTCAGTCCAG (Motif 6)

A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
Reverse Opposite:
A G T C A C G T A C T G C T A G C G T A A G T C A C G T A C T G C G T A T A G C
p-value:1e-19
log p-value:-4.509e+01
Information Content per bp:1.791
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.9 +/- 25.3bp
Average Position of motif in Background57.5 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTCAGTCCAG
ATCACCCCAT
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GTCAGTCCAG
CNGTCACGCCAC
 A C G T A C G T A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTCAGTCCAG
ATCACCCCAT
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCAGTCCAG
ATCACCCCAC
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGTCCAG
NTGTCAN-----
 A C G T A C G T A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCAGTCCAG
-TCAGTCTT-
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTCAGTCCAG---
---ATGCCAGACN
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCAGTCCAG
AGTCACGC---
 A C G T A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCAGTCCAG-
-RCATTCCWGG
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G A C G T
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCAGTCCAG
GTCATN----
 A T C G A C G T A G T C C G T A T C A G G C A T A G T C A G T C G T C A T C A G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T