Information for 13-CAAATRATTAAAA (Motif 15)

G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A
Reverse Opposite:
C A G T C G A T A C G T C A G T G T C A C G T A A C G T A G T C G C T A A C G T A G C T A C G T A C T G
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.761
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 25.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0018.1_Dbx1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAATRATTAAAA----
TAATTAATTAATAATTA
 G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PH0093.1_Lhx3/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAAATRATTAAAA---
GAAATTAATTAAATAAT
 A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAAATRATTAAAA-
---NTAATTAATAT
 G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAAATRATTAAAA
--AATAATT----
 G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAATRATTAAAA----
TAATTAATTAATAACTA
 G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0120.1_Nkx6-3/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAAATRATTAAAA---
CNNANTAATTAATTNNC
 A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAAATRATTAAAA---
CGAATTAATTAAATACT
 A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0100.1_Lmx1a/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAAATRATTAAAA---
CGAATTAATTAAAAACC
 A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAAATRATTAAAA-
GCGAACTAATTAATGC
 A C G T A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAAATRATTAAAA---
NNAATTAATTAAAAANN
 A C G T G T A C C G T A C T G A C G T A C G A T C T A G G T C A C G A T A C G T G T C A G T C A C G T A G C T A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T