Information for 8-TGCGCCTGAGAGG (Motif 7)

A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T G C A C G T A G T C C G T A A C T G A C T G A T G C C T A G A G T C C G T A
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 24.1bp
Average Position of motif in Background54.8 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGCGCCTGAGAGG--
----CTTGAGTGGCT
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGCGCCTGAGAGG
-----TTGACAGC
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCGCCTGAGAGG
---VGCTGWCAVB
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCGCCTGAGAGG---
-NNNACCGAGAGTNNN
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCGCCTGAGAGG--
ATTGCCTGAGGCGAA
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCGCCTGAGAGG
-----TTGACAGG
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGCGCCTGAGAGG
-----TTGACAG-
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCGCCTGAGAGG-
--TGAGTGACAGSC
 A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCCTGAGAGG
CTGTTCCTGG----
 A C G T A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCGCCTGAGAGG
CTGCGCATGCGC--
 A C G T A C G T A C T G A G T C A T C G A G T C A G T C A C G T A C T G C G T A A T C G C G T A A C T G A C T G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T